ycbP [2019-06-07 08:32:11]

general stress protein

locus: BSU02590

pI: 6.31

mw: 13.91 kDa

protein length: 128 aa

gene length: 387 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 281,769 → 282,155

The protein

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|EC3362AC3EE2595938A429D2839C5E362F514233|ycbP]
  description: [pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • induced by stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]) [Pubmed|15805528]

Biological materials

Mutant

• MGNA-C037 (ycbP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2035 NBRP B. subtilis, Japan]
• BKE02590 (Δ[gene|EC3362AC3EE2595938A429D2839C5E362F514233|ycbP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTACAATTCCTCCTTTTG, downstream forward: _UP4_TAATGGAAAGGCCGGTGCTG
• BKK02590 (Δ[gene|EC3362AC3EE2595938A429D2839C5E362F514233|ycbP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTACAATTCCTCCTTTTG, downstream forward: _UP4_TAATGGAAAGGCCGGTGCTG

References

• 15805528